Alpha helix of primary polypeptide structure is stabilized by
The question asks what stabilizes the alpha helix. So, the options are missing, but the correct answer is probably hydrogen bonds. Let me think why. In an alpha helix, the backbone forms a right-handed coil where each amino acid residue is hydrogen-bonded to the one four residues ahead. The hydrogen bonds are between the carbonyl oxygen of one amino acid and the amide hydrogen of another, four positions away. This creates the helical structure.
Now, the common incorrect options might include things like ionic bonds, disulfide bridges, hydrophobic interactions, or maybe peptide bonds. Let's break them down. Ionic bonds are between side chains of amino acids, which is more about tertiary structure. Disulfide bridges are covalent bonds between cysteine residues in tertiary or quaternary structures. Peptide bonds are part of the primary structure, connecting amino acids. Hydrophobic interactions are also part of tertiary structure. So, the correct stabilization here is hydrogen bonds between the backbone atoms.
Wait, but the question mentions the primary polypeptide structure. Wait, no—primary structure is just the sequence. Secondary structure includes alpha helix and beta sheets, which are stabilized by hydrogen bonds. So the question might have a mistake in wording. The alpha helix is part of secondary structure, not primary. But the question says "primary polypeptide structure," which is confusing. Maybe that's a trick in the question. So the correct answer is hydrogen bonds, but the question's wording is tricky. The student needs to remember that primary is the sequence, secondary is alpha helix and beta sheets, stabilized by hydrogen bonds.
**Core Concept**
The **alpha helix** is a common secondary structure in proteins, stabilized by **hydrogen bonds** between the backbone amide and carbonyl groups. This is distinct from primary structure (amino acid sequence) and tertiary/quaternary interactions (e.g., disulfide bonds, hydrophobic interactions).
**Why the Correct Answer is Right**
The alpha helix forms when hydrogen bonds occur between the **C=O oxygen** of one amino acid and the **N–H hydrogen** of the amino acid four residues ahead along the backbone. These bonds form a right-handed coil, with a pitch of 5.4 Å per turn and 3.6 residues per turn. This hydrogen bonding pattern is intrinsic to the secondary structure and does not involve side chains or covalent bonds.
**Why Each Wrong Option is Incorrect**
**Option A:** Ionic bonds (salt bridges) stabilize tertiary/quaternary structures but are not involved in alpha helices.
**Option B:** Peptide bonds form the primary structure (amino acid linkage) but do not stabilize secondary structures.
**Option C:** Disulfide bonds (covalent) stabilize tertiary/quaternary structures, not secondary structures like alpha helices.
**Option D:** Hydrophobic interactions drive protein folding in tertiary structures but are irrelevant to alpha helix stabilization.